Research

Learning anatomy without losing sight of variation.

I develop machine-learning methods for medical images with an emphasis on generalization, data efficiency, anatomical fidelity, and reproducibility.

01 · Brain extraction

Reliable preprocessing across modalities

Brain extraction is a foundational step in neuroimaging. My work investigates supervised and synthetic-data approaches that remain accurate across imaging modalities, acquisition conditions, species, and anatomy.

  • Skull stripping
  • Multi-modal MRI
  • Synthetic training
  • Generalization
Brain extraction examples showing source images, predictions, and reference masks

02 · Segmentation & anomaly detection

Structure-aware analysis

I study segmentation and registration methods that use shape, location, and tissue context—not intensity alone. Applications include neuroimaging and retinal OCT analysis for detecting glaucomatous defects.

  • Registration
  • OCT
  • Deep CRFs
  • 3D structure
Medical image segmentation visualization with anatomical regions highlighted

03 · Synthesis & inpainting

Training data built around anatomy

When curated medical data are scarce, synthesis can provide controlled training examples. My research spans fully synthetic skull-stripping data, cross-modality translation, self-supervised denoising, and anatomy-preserving brain inpainting.

  • Simulation
  • GANs
  • Inpainting
  • Self-supervision
Synthetic medical image generation workflow and example volumes

Collaborate

Interested in robust medical image analysis?

I welcome conversations around neuroimaging, segmentation, synthetic data, retinal imaging, and open-source scientific software.

Get in touch